Benchmark

Interaction Type Detail
Protein-Carbohydrate
  • 497 DataSet by Artificial Neural Network based on Bagging
  • 497 DataSet by Artificial Neural Network
  • 497 DataSet by Support Vector Machine
  • 15 Glycan-Antibody Independent Set by Support Vector Machine
  • 108 Independent Test Set by Artificial Neural Network based on Bagging
  • Anti-peptide Antibody by Protein-Carbohydrate Model
  • S88 unbounded DataSet by Artificial Neural Network
  • S88 unbounded DataSet by Support Vector Machine
  • S88 unbounded DataSet by Artificial Neural Network based on Bagging
  • S23 unbounded DataSet by Artificial Neural Network based on Bagging
  • Protein-Protein
  • S432 DataSet by ANN_Bagging
  • S432 DataSet by SVM_Bagging
  • S142 DataSet by ANN_Bagging
  • S17a unbounded DataSet by ANN_Bagging
  • S67 DataSet by ANN_Bagging
  • S58 DataSet by ANN_Bagging
  • PPI-Test
  • S13a unbounded DataSet by ANN_Bagging
  • S44 DataSet by ANN_Bagging
  • Anti-protein Antibody variable domain
  • Anti-protein Antibody VH domain
  • Anti-protein Antibody VL domain
  • Antigen (Epitopia)
  • Anti-peptide Antibody
  • Paratope
  • Epitope
  • SEPPA TestSet by ANN_Bagging
  • SEPPATrain84 by ANN_Bagging
  • SEPPATest116 by ANN_Bagging
  • SeppaTest84PPI_JNN by ANN_Bagging
  • SeppaTest116-7-11 by ANN_Bagging
  • S119
  • Protein-Ligand
  • S48 bounded DataSet by Artificial Neural Network based on Bagging
  • S48 unbounded DataSet by Artificial Neural Network based on Bagging
  • S198 DataSet by Artificial Neural Network based on Bagging
  • S210 DataSet by Artificial Neural Network based on Bagging
  • S523 DataSet By Artificial Neural Network based on Bagging
  • Model DataSet By Artificial Neural Network based on Bagging
  • Protein-Peptide
  • S452 DataSet By Artificial Neural Network based on Bagging
  • 263 DataSet By Artificial Neural Network based on Bagging
  • 140 DataSet By Artificial Neural Network based on Bagging
  • Anti-peptide Antibody by PPep Model
  • Anti-protein Antibody variable domain by PPep Model
  • Druggable PPI hotspot sites
  • Druggable PPI hotspot sites benchmark results(2P2I)
  • Protein-Polynucleic Acid
    DNA+RNA
  • Protein-(DNA+RNA)
  • Protein-DNA [DBP123] [Holo83] [Apo83]
    Protein-RNA [T206] [B106] [UB54] [HMUB21] [B44] [SG1003]
    FMN [P81] [P30] [P15]
    Heme [Training#1] [Training#2] [Test#1] [Test#2] [Holo] [Apo]
    FA [P75] [P25] [Holo] [Apo]
    Protein-Zinc(Zn)
  • Zinc Training and Testing Data Set
  • Zinc Independent Test Data Set
  • Zinc Unbound Data Set
  • Protein-Magnesium(Mg)
  • Magnesium Training and Testing Data Set
  • Magnesium Independent Test Data Set
  • Magnesium Unbound Data Set
  • Protein-Calcium(Ca)
  • Calcium Training and Testing Data Set
  • Calcium Independent Test Data Set
  • Calcium Unbound Data Set
  • Protein-Copper(Cu)
  • Copper Training and Testing Data Set
  • Copper Independent Test Data Set
  • Copper Unbound Data Set
  • Protein-Manganese(Mn)
  • Manganese Training and Testing Data Set
  • Manganese Independent Test Data Set
  • Manganese Unbound Data Set
  • Human germline models and functional Ab
  • Prediction result (Confidence level)
  • DataSet\ModelPPIGlycanPPep
    Anti-protein Ab Link - Link
    Anti-glycan Ab - - -
    Anti-peptide Ab Link - Link